STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_047620Uncharacterized protein. (573 aa)    
Predicted Functional Partners:
NFIA_040120
Proline racemase, putative.
   
 
  0.900
NFIA_073030
FAD dependent oxidoreductase superfamily.
     
  0.900
NFIA_075980
D-amino acid oxidase.
     
  0.900
NFIA_004660
FAD dependent oxidoreductase, putative.
     
  0.900
NFIA_091070
TRAF-like signal transducer, putative.
   
 0.630
NFIA_071410
ZZ type zinc finger domain protein.
   
 0.571
NFIA_105720
Polyubiquitin (UbiD), putative.
    
 0.553
NFIA_086470
Developmental regulator FlbA.
    
 0.534
NFIA_086340
U-box domain protein.
    
  0.530
NFIA_058480
Stress response regulator/HFS transcription factor, putative.
    
 0.528
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.