STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFIA_m0240Ribosomal protein S5. (410 aa)    
Predicted Functional Partners:
NFIA_064910
DUF1713 domain-containing protein.
    
 
 0.492
NFIA_102940
37S ribosomal protein Rsm24, putative.
    
   0.459
NFIA_103510
50S ribosomal protein L36, putative.
    
   0.459
NFIA_104090
50S ribosomal protein L2.
    
   0.459
NFIA_105350
50S ribosomal protein L24.
    
   0.459
NFIA_105590
50S ribosomal protein L30, putative.
    
   0.459
NFIA_107170
60S ribosomal protein L25, putative.
    
   0.459
NFIA_107220
Uncharacterized protein.
    
   0.459
NFIA_108550
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
    
   0.459
NFIA_108595
60S ribosomal protein L34.
    
   0.459
Your Current Organism:
Aspergillus fischeri
NCBI taxonomy Id: 331117
Other names: A. fischeri NRRL 181, Aspergillus fischeri NRRL 181, Neosartorya fischeri NRRL 181
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.