STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_30048Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (883 aa)    
Predicted Functional Partners:
CQW23_17959
F-box domain-containing protein.
  
     0.488
CQW23_32027
Uncharacterized protein.
  
    0.487
CQW23_31097
F-box domain-containing protein.
  
     0.480
CQW23_22642
F-box domain-containing protein.
  
     0.450
CQW23_05835
FBA_1 domain-containing protein.
  
     0.437
CQW23_05700
Uncharacterized protein.
  
     0.436
CQW23_31096
Uncharacterized protein.
  
     0.433
CQW23_00230
DUF295 domain-containing protein.
  
     0.431
CQW23_30513
NAC domain-containing protein 53.
  
     0.428
CQW23_22068
F-box domain-containing protein.
  
     0.422
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.