STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_28033Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
CQW23_21422
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
     
 0.910
CQW23_07680
Uncharacterized protein.
  
  
 
0.897
CQW23_33926
Uncharacterized protein.
  
  
 
0.823
CQW23_34652
Uncharacterized protein.
  
  
 
0.821
CQW23_30433
Uncharacterized protein.
  
  
 
0.819
CQW23_19927
Terpene_synth_C domain-containing protein.
  
  
 
0.649
CQW23_25425
Uncharacterized protein.
  
  
 
0.646
CQW23_14594
Uncharacterized protein.
  
  
 
0.644
CQW23_00057
BTB/POZ domain-containing protein.
  
     0.508
CQW23_25481
Pentatricopeptide repeat-containing protein, chloroplastic.
  
     0.504
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.