STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_28855Uncharacterized protein. (228 aa)    
Predicted Functional Partners:
CQW23_24784
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.860
CQW23_15438
Protein Asterix.
   
   0.768
CQW23_23268
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
 
 0.767
CQW23_04350
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
 
 0.767
CQW23_07126
60S ribosomal protein L35a-3.
   
   0.762
CQW23_20231
Putative 60S ribosomal protein L18-1.
    
   0.761
CQW23_32539
60S ribosomal protein L27.
    
   0.760
CQW23_23900
Uncharacterized protein.
    
 
 0.710
CQW23_21448
Uncharacterized protein.
    
 
 0.710
CQW23_20436
Uncharacterized protein.
    
 
 0.710
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.