STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_29429Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
CQW23_28821
Uncharacterized protein.
  
     0.511
CQW23_13925
Uncharacterized protein.
  
     0.460
CQW23_27953
Cytochrome c oxidase assembly protein COX15.
    
 0.459
CQW23_27606
Uncharacterized protein.
  
     0.441
CQW23_20738
Auxin transporter-like protein 3.
  
    0.441
CQW23_29299
ABC2_membrane domain-containing protein.
  
     0.436
CQW23_12735
Amino acid permease 2.
  
    0.432
CQW23_27178
BAH domain-containing protein.
  
 
   0.429
CQW23_23938
Auxin transporter-like protein 1.
  
    0.422
CQW23_21589
Auxin transporter-like protein 1.
  
    0.422
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.