STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_25475Serine/threonine-protein kinase 4. (812 aa)    
Predicted Functional Partners:
CQW23_28129
Uncharacterized protein.
    
  0.835
CQW23_21840
Protein SPA1-RELATED 3.
    
  0.835
CQW23_17827
Uncharacterized protein.
    
  0.835
CQW23_08703
TRAF-type domain-containing protein.
    
  0.835
CQW23_25474
DUF150 domain-containing protein.
      
 0.543
CQW23_23721
Uncharacterized protein.
   
 0.493
CQW23_19832
E3 ubiquitin-protein ligase KEG.
   
0.493
CQW23_22236
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
      
 0.416
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.