STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_26451Chromatin structure-remodeling complex protein SYD. (1250 aa)    
Predicted Functional Partners:
CQW23_31592
Uncharacterized protein.
   
 0.957
CQW23_31591
Uncharacterized protein.
   
 0.957
CQW23_19920
ANK_REP_REGION domain-containing protein.
   
 0.957
CQW23_19924
Uncharacterized protein.
   
 0.957
CQW23_19922
ANK_REP_REGION domain-containing protein.
   
 0.957
CQW23_19923
Uncharacterized protein.
   
 0.957
CQW23_12450
Uncharacterized protein.
   
 0.957
CQW23_07401
Actin-related protein 4; Belongs to the actin family.
    
 0.957
CQW23_11252
Protein STIG1.
    
  0.943
CQW23_04849
Uncharacterized protein.
    
  0.943
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.