STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_24005Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (258 aa)    
Predicted Functional Partners:
CQW23_28239
Glucan endo-1,3-beta-glucosidase 8; Belongs to the glycosyl hydrolase 17 family.
    
 
 0.452
CQW23_18843
WRKY domain-containing protein.
  
     0.416
CQW23_18307
Putative methyltransferase PMT26.
  
  0.414
CQW23_23721
Uncharacterized protein.
   
  0.408
CQW23_19832
E3 ubiquitin-protein ligase KEG.
   
  0.408
CQW23_21822
Putative leucine-rich repeat receptor-like protein kinase IMK3.
  
 
  0.407
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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