STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_24349Uncharacterized protein. (1160 aa)    
Predicted Functional Partners:
CQW23_15339
D-aminoacyl-tRNA deacylase.
    
 0.646
CQW23_24707
Uncharacterized protein.
    
  0.596
CQW23_24810
RNase_PH domain-containing protein.
    
  0.596
CQW23_15842
Uncharacterized protein.
    
  0.596
CQW23_13407
mRNA-decapping enzyme subunit 2.
   
 0.587
CQW23_22140
S1 domain-containing protein.
    
 0.486
CQW23_28318
Uncharacterized protein.
     
 0.477
CQW23_30323
mRNA-decapping enzyme-like protein.
    
  0.456
CQW23_21078
Uncharacterized protein.
    
  0.456
CQW23_09558
Exosome complex exonuclease RRP46-like protein.
    
  0.456
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.