STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_21848Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (364 aa)    
Predicted Functional Partners:
CQW23_33942
L-ascorbate oxidase-like protein.
    
 
 0.569
CQW23_05425
L-ascorbate oxidase-like protein.
    
 
 0.569
CQW23_17227
L-ascorbate oxidase-like protein.
    
 
 0.505
CQW23_27996
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  
  0.477
CQW23_06321
NB-ARC domain-containing protein.
  
     0.473
CQW23_27768
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  
  0.465
CQW23_33819
NB-ARC domain-containing protein.
  
     0.464
CQW23_06508
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.459
CQW23_21716
Uncharacterized protein.
  
 
   0.456
CQW23_27237
Uncharacterized protein.
  
 
   0.453
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.