STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_23016NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family. (931 aa)    
Predicted Functional Partners:
CQW23_23582
Zinc finger CCCH domain-containing protein 38.
  
     0.460
CQW23_20056
DUF3444 domain-containing protein.
  
     0.453
CQW23_06891
F-box domain-containing protein.
  
     0.452
CQW23_32929
F-box domain-containing protein.
  
     0.448
CQW23_03842
Uncharacterized protein.
  
 
   0.446
CQW23_03967
F-box domain-containing protein.
  
     0.444
CQW23_03966
F-box domain-containing protein.
  
     0.443
CQW23_27847
XS domain-containing protein.
  
     0.442
CQW23_07682
Uncharacterized protein.
  
     0.442
CQW23_31330
F-box domain-containing protein.
  
     0.437
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.