STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_17953Uncharacterized protein. (165 aa)    
Predicted Functional Partners:
CQW23_31894
CaM_binding domain-containing protein.
  
     0.517
CQW23_32209
CaM_binding domain-containing protein.
  
     0.516
CQW23_14870
Uncharacterized protein.
  
     0.507
CQW23_10077
Uncharacterized protein.
  
     0.490
CQW23_21001
Uncharacterized protein.
  
     0.488
CQW23_15652
UBA domain-containing protein.
  
     0.476
CQW23_25730
Uncharacterized protein.
  
     0.474
CQW23_05073
GATA-type domain-containing protein.
  
     0.462
CQW23_08331
Uncharacterized protein.
  
     0.461
CQW23_11511
Uncharacterized protein.
  
     0.457
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.