STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_18312Poly [ADP-ribose] polymerase. (185 aa)    
Predicted Functional Partners:
CQW23_30135
Ethylene-overproduction protein 1.
  
     0.460
CQW23_03857
Mini zinc finger protein 1.
  
     0.453
CQW23_24574
Uncharacterized protein.
  
     0.447
CQW23_34008
Mini zinc finger protein 1.
  
     0.444
CQW23_11866
Mini zinc finger protein 1.
  
     0.442
CQW23_04242
Uncharacterized protein.
  
     0.440
CQW23_22102
Uncharacterized protein.
  
     0.418
CQW23_13981
Histone deacetylase 11.
    
  0.414
CQW23_18981
MBD domain-containing protein.
  
     0.413
CQW23_07571
Homeobox-leucine zipper protein ROC6.
  
     0.410
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.