STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_14471AAI domain-containing protein. (158 aa)    
Predicted Functional Partners:
CQW23_26450
SnAC domain-containing protein.
    
 0.658
CQW23_26451
Chromatin structure-remodeling complex protein SYD.
    
 0.658
CQW23_26460
Protein TRAUCO.
    
 0.615
CQW23_28078
Protein kinase domain-containing protein.
    
 0.534
CQW23_01966
Pectate_lyase_3 domain-containing protein.
  
 
  0.523
CQW23_15773
DOMON domain-containing protein.
  
 
   0.519
CQW23_01837
TAXi_C domain-containing protein.
  
     0.515
CQW23_30539
Phytocyanin domain-containing protein.
  
  0.514
CQW23_05808
Uncharacterized protein.
   
 0.514
CQW23_20762
DUF569 domain-containing protein.
  
 
  0.512
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.