STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_15032Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (432 aa)    
Predicted Functional Partners:
CQW23_29655
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
 
 0.556
CQW23_11844
Histone deacetylase 5.
    
 
 0.539
CQW23_04842
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.539
CQW23_18985
Uncharacterized protein.
     
 0.524
CQW23_18986
Uncharacterized protein.
     
 0.524
CQW23_19332
Guanine nucleotide-binding protein alpha-1 subunit.
     
 0.524
CQW23_19717
Glycosyltransferase.
     
 0.524
CQW23_20806
Extra-large guanine nucleotide-binding protein 2.
     
 0.524
CQW23_08126
Extra-large guanine nucleotide-binding protein 3.
     
 0.524
CQW23_05817
Extra-large guanine nucleotide-binding protein 1.
     
 0.524
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.