STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_1259028 kDa ribonucleoprotein, chloroplastic. (210 aa)    
Predicted Functional Partners:
CQW23_13063
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.974
CQW23_14651
Uncharacterized protein.
    
 0.972
CQW23_00524
Peroxisome biogenesis protein 19-1.
    
 0.972
CQW23_15454
Peroxisomal membrane protein PEX14.
   
 0.807
CQW23_11991
Pex14_N domain-containing protein.
   
 0.807
CQW23_30295
Peroxisomal membrane protein PEX16.
    
 0.800
CQW23_18739
Peroxisomal membrane protein PEX16.
    
 0.800
CQW23_23710
Uncharacterized protein.
   
 0.761
CQW23_18753
Peroxisomal membrane protein 11E.
   
 0.761
CQW23_10911
Peroxisomal membrane protein 11-3.
   
 0.761
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.