STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_08080Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
CQW23_22115
7-hydroxymethyl chlorophyll a reductase, chloroplastic.
     
 0.848
CQW23_22600
ASCH domain-containing protein.
     
 0.841
CQW23_00283
Protein STAY-GREEN 1, chloroplastic.
     
 0.813
CQW23_05664
Vacuolar protein sorting-associated protein 52 A.
    
 
 0.792
CQW23_03265
Vacuolar protein sorting-associated protein 54, chloroplastic.
    
 
 0.669
CQW23_04039
Vacuolar protein sorting-associated protein 54, chloroplastic.
    
 
 0.669
CQW23_28861
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.639
CQW23_24694
Syntaxin-51.
    
 
 0.639
CQW23_18054
Syntaxin-51.
    
 
 0.639
CQW23_07384
Syntaxin-52.
    
 
 0.639
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.