STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_08126Extra-large guanine nucleotide-binding protein 3. (847 aa)    
Predicted Functional Partners:
CQW23_20938
Guanine nucleotide-binding protein subunit beta.
   
 0.948
CQW23_18375
Uncharacterized protein.
   
 0.880
CQW23_18377
Uncharacterized protein.
   
 0.880
CQW23_03891
HAUS6_N domain-containing protein.
    
 0.801
CQW23_04579
Zinc finger protein CONSTANS-LIKE 13.
    
 0.801
CQW23_05844
HAUS6_N domain-containing protein.
    
 0.801
CQW23_29977
Protein CHUP1, chloroplastic.
    
 0.742
CQW23_14674
Ubiquitin carboxyl-terminal hydrolase.
    
 0.742
CQW23_00796
Ubiquitin carboxyl-terminal hydrolase.
    
 0.742
CQW23_12379
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.737
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.