STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_08458MATH domain-containing protein. (142 aa)    
Predicted Functional Partners:
CQW23_30635
Cullin-1; Belongs to the cullin family.
   
 0.589
CQW23_22049
Putative cullin-like protein 1; Belongs to the cullin family.
   
 0.589
CQW23_20161
Cullin domain-containing protein; Belongs to the cullin family.
   
 0.589
CQW23_13626
Cullin-2; Belongs to the cullin family.
   
 0.589
CQW23_13578
Putative cullin-like protein 2; Belongs to the cullin family.
   
 0.589
CQW23_15690
Cullin-1; Belongs to the cullin family.
   
 0.589
CQW23_05549
Cullin-3; Belongs to the cullin family.
   
 0.589
CQW23_00580
Uncharacterized protein.
   
 0.589
CQW23_01736
Cullin-3; Belongs to the cullin family.
   
 0.589
CQW23_02268
Cullin-1; Belongs to the cullin family.
   
 0.589
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.