STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_08383J domain-containing protein. (479 aa)    
Predicted Functional Partners:
CQW23_17610
Uncharacterized protein.
    
  0.954
CQW23_16757
Heat shock 70 kDa protein 17.
   
 0.730
CQW23_09744
Uncharacterized protein.
    
  0.581
CQW23_11701
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.557
CQW23_10530
Uncharacterized protein.
   
   0.546
CQW23_27274
30S ribosomal protein S16, chloroplastic.
   
   0.543
CQW23_16029
60S ribosomal protein L12-1; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.537
CQW23_06258
Ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
  
   0.530
CQW23_04072
2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal.
    
   0.526
CQW23_27312
Uncharacterized protein.
   
   0.516
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
Server load: low (18%) [HD]