STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_04787Thiol-disulfide oxidoreductase LTO1. (381 aa)    
Predicted Functional Partners:
CQW23_31669
NmrA domain-containing protein.
  
  
 0.653
CQW23_18064
Thioredoxin-like protein, chloroplastic.
  
 
 0.596
CQW23_05812
Oxygen-evolving enhancer protein 1, chloroplastic.
  
 
 
 0.580
CQW23_05761
Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic.
  
   
 0.578
CQW23_03364
Oxygen-evolving enhancer protein 1, chloroplastic.
  
 
 
 0.577
CQW23_18957
Peptidylprolyl isomerase.
    
 
 0.575
CQW23_18481
Uncharacterized protein.
     
 0.562
CQW23_11127
Protein SPA, chloroplastic.
      
 0.543
CQW23_23884
Protein TIC 62, chloroplastic.
  
  
  0.521
CQW23_03269
Photosystem II stability/assembly factor, chloroplastic.
  
   
 0.516
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.