STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_05219Protein MRG1. (253 aa)    
Predicted Functional Partners:
CQW23_04986
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.963
CQW23_02167
SWR1-complex protein 4.
    
 0.963
CQW23_07401
Actin-related protein 4; Belongs to the actin family.
   
 0.956
CQW23_08652
SWR1 complex subunit 2.
    
 0.945
CQW23_22612
Uncharacterized protein.
   
 0.908
CQW23_07323
Uncharacterized protein.
   
 0.908
CQW23_33551
Histone deacetylase 6.
    
 0.906
CQW23_31829
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.906
CQW23_27082
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.906
CQW23_22774
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.906
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.