STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_00172F-box domain-containing protein. (384 aa)    
Predicted Functional Partners:
CQW23_11582
Uncharacterized protein.
  
 
 0.918
CQW23_29448
Serine--glyoxylate aminotransferase.
  
 
 0.697
CQW23_01464
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
    
 0.697
CQW23_23109
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.570
CQW23_17735
Peroxisomal (S)-2-hydroxy-acid oxidase GLO1.
  
 
 0.542
CQW23_30743
UPF0029 domain-containing protein.
    
  0.540
CQW23_27564
UPF0029 domain-containing protein.
    
  0.540
CQW23_04871
Phosphoserine aminotransferase.
     
 0.529
CQW23_05172
AB hydrolase-1 domain-containing protein.
     
 0.529
CQW23_28972
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.528
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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