STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW23_00084Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
CQW23_19071
Uncharacterized protein.
  
 
  0.557
CQW23_11527
GDSL esterase/lipase.
  
     0.538
CQW23_21328
Phenylalanine ammonia-lyase.
  
     0.533
CQW23_19939
Uncharacterized protein.
  
     0.533
CQW23_08156
Auxin response factor 21.
  
 
   0.530
CQW23_14342
Uncharacterized protein.
  
     0.528
CQW23_04208
Uncharacterized protein.
  
 
   0.528
CQW23_15650
Autophagy-related protein 18a.
  
 
   0.527
CQW23_11871
Uncharacterized protein.
  
   
 0.524
CQW23_15647
Autophagy-related protein 18a.
  
 
   0.523
Your Current Organism:
Capsicum baccatum
NCBI taxonomy Id: 33114
Other names: C. baccatum, Capsicum baccatum L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.