Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G5S_0195 | rplB | G5S_0195 | G5S_0401 | Trigger factor. | Ribosomal protein L2. | 0.936 |
G5S_0195 | rplC | G5S_0195 | G5S_0398 | Trigger factor. | Ribosomal protein L3. | 0.950 |
G5S_0195 | rplD | G5S_0195 | G5S_0399 | Trigger factor. | Ribosomal protein L4/L1 family. | 0.936 |
G5S_0195 | rplM | G5S_0195 | G5S_0894 | Trigger factor. | Ribosomal protein L13. | 0.947 |
G5S_0195 | rpsB | G5S_0195 | G5S_0351 | Trigger factor. | 30S ribosomal protein. | 0.951 |
G5S_0195 | rpsD | G5S_0195 | G5S_0310 | Trigger factor. | Ribosomal protein S4. | 0.941 |
G5S_0195 | rpsG | G5S_0195 | G5S_0514 | Trigger factor. | Ribosomal protein S7. | 0.962 |
G5S_0195 | rpsJ | G5S_0195 | G5S_0516 | Trigger factor. | Ribosomal protein S10. | 0.936 |
G5S_0195 | rpsK | G5S_0195 | G5S_0418 | Trigger factor. | Ribosomal protein S11. | 0.927 |
G5S_0195 | rpsL | G5S_0195 | G5S_0513 | Trigger factor. | Ribosomal protein S12. | 0.929 |
rplB | G5S_0195 | G5S_0401 | G5S_0195 | Ribosomal protein L2. | Trigger factor. | 0.936 |
rplB | rplC | G5S_0401 | G5S_0398 | Ribosomal protein L2. | Ribosomal protein L3. | 0.997 |
rplB | rplD | G5S_0401 | G5S_0399 | Ribosomal protein L2. | Ribosomal protein L4/L1 family. | 0.997 |
rplB | rplM | G5S_0401 | G5S_0894 | Ribosomal protein L2. | Ribosomal protein L13. | 0.991 |
rplB | rpsB | G5S_0401 | G5S_0351 | Ribosomal protein L2. | 30S ribosomal protein. | 0.989 |
rplB | rpsD | G5S_0401 | G5S_0310 | Ribosomal protein L2. | Ribosomal protein S4. | 0.991 |
rplB | rpsG | G5S_0401 | G5S_0514 | Ribosomal protein L2. | Ribosomal protein S7. | 0.990 |
rplB | rpsJ | G5S_0401 | G5S_0516 | Ribosomal protein L2. | Ribosomal protein S10. | 0.991 |
rplB | rpsK | G5S_0401 | G5S_0418 | Ribosomal protein L2. | Ribosomal protein S11. | 0.993 |
rplB | rpsL | G5S_0401 | G5S_0513 | Ribosomal protein L2. | Ribosomal protein S12. | 0.992 |
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