STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpdADihydrolipoamide dehydrogenase. (461 aa)    
Predicted Functional Partners:
G5S_0669
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit.
  
 0.999
G5S_0830
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase.
 0.998
G5S_0542
2-oxo acid dehydrogenase.
 0.997
sucB
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase.
 0.996
G5S_0831
Pyruvate dehydrogenase beta.
  
 0.996
sucA
2-oxoglutarate dehydrogenase, E1 component.
  
 0.995
pdhA
Pyruvate dehydrogenase, E1 component, alpha subunit.
  
 
 0.989
G5S_0698
Glycine cleavage system H protein.
 
  
 0.980
glyA
Serine hydroxymethyltransferase.
  
 0.970
G5S_1081
Ribose-phosphate pyrophosphokinase.
  
 0.874
Your Current Organism:
Chlamydia pecorum
NCBI taxonomy Id: 331635
Other names: C. pecorum E58, Chlamydia pecorum E58, Chlamydophila pecorum ATCC VR-628, Chlamydophila pecorum E58, Chlamydophila pecorum str. E58, Chlamydophila pecorum strain E58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.