STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipALipoic acid synthetase. (304 aa)    
Predicted Functional Partners:
lplA
Lipoate protein ligase-like protein.
 
 
 0.959
G5S_0430
Lipoate protein ligase-like protein.
  
 
 0.934
lpdA
Dihydrolipoamide dehydrogenase.
  
  
 0.860
nrdA
Ribonucleoside-diphosphate reductase, alpha subunit.
 
 
    0.721
G5S_0698
Glycine cleavage system H protein.
   
 0.613
G5S_0181
NifU-like protein.
  
 
 0.584
G5S_0208
Conserved hypothetical protein.
       0.537
G5S_0211
Type III secretion protein SctJ.
       0.526
G5S_0212
Conserved hypothetical protein.
       0.525
G5S_0522
GTP-binding protein Obg/CgtA.
 
      0.434
Your Current Organism:
Chlamydia pecorum
NCBI taxonomy Id: 331635
Other names: C. pecorum E58, Chlamydia pecorum E58, Chlamydophila pecorum ATCC VR-628, Chlamydophila pecorum E58, Chlamydophila pecorum str. E58, Chlamydophila pecorum strain E58
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