STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrStyrosyl-tRNA synthetase. (412 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase.
  
 0.875
pheT
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.848
gnd
6-phosphogluconate dehydrogenase, decarboxylating.
  
  
 0.760
tsf
Translation elongation factor Ts.
 
 
 0.731
argS
arginyl-tRNA synthetase.
  
  
 0.692
prfA
Peptide chain release factor 1.
  
  
 0.679
ileS
Isoleucyl-tRNA synthetase.
  
  
 0.671
gltX
glutamyl-tRNA synthetase.
  
 
 0.668
pheS
phenylalanyl-tRNA synthetase, alpha subunit.
  
  
 0.625
radA
DNA repair protein RadA.
      
 0.581
Your Current Organism:
Chlamydia pecorum
NCBI taxonomy Id: 331635
Other names: C. pecorum E58, Chlamydia pecorum E58, Chlamydophila pecorum ATCC VR-628, Chlamydophila pecorum E58, Chlamydophila pecorum str. E58, Chlamydophila pecorum strain E58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.