Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G5O_0040 | G5O_0087 | G5O_0040 | G5O_0087 | FHA domain protein. | TPR domain protein. | 0.833 |
G5O_0040 | G5O_0349 | G5O_0040 | G5O_0349 | FHA domain protein. | PBS lyase HEAT-like repeat domain protein. | 0.771 |
G5O_0040 | G5O_0697 | G5O_0040 | G5O_0697 | FHA domain protein. | Signal peptidase I. | 0.588 |
G5O_0040 | G5O_0703 | G5O_0040 | G5O_0703 | FHA domain protein. | Conserved hypothetical protein. | 0.770 |
G5O_0040 | G5O_0781 | G5O_0040 | G5O_0781 | FHA domain protein. | Peptidase family S41. | 0.714 |
G5O_0040 | recO | G5O_0040 | G5O_0176 | FHA domain protein. | DNA repair protein RecO. | 0.726 |
G5O_0087 | G5O_0040 | G5O_0087 | G5O_0040 | TPR domain protein. | FHA domain protein. | 0.833 |
G5O_0087 | G5O_0349 | G5O_0087 | G5O_0349 | TPR domain protein. | PBS lyase HEAT-like repeat domain protein. | 0.772 |
G5O_0087 | G5O_0417 | G5O_0087 | G5O_0417 | TPR domain protein. | Conserved hypothetical protein. | 0.905 |
G5O_0087 | G5O_0418 | G5O_0087 | G5O_0418 | TPR domain protein. | Conserved hypothetical protein. | 0.905 |
G5O_0087 | G5O_0518 | G5O_0087 | G5O_0518 | TPR domain protein. | Outer membrane protein, OMP85 family, putative. | 0.983 |
G5O_0087 | G5O_0697 | G5O_0087 | G5O_0697 | TPR domain protein. | Signal peptidase I. | 0.838 |
G5O_0087 | G5O_0703 | G5O_0087 | G5O_0703 | TPR domain protein. | Conserved hypothetical protein. | 0.772 |
G5O_0087 | G5O_0781 | G5O_0087 | G5O_0781 | TPR domain protein. | Peptidase family S41. | 0.765 |
G5O_0087 | G5O_1026 | G5O_0087 | G5O_1026 | TPR domain protein. | tolB protein, putative. | 0.854 |
G5O_0087 | recO | G5O_0087 | G5O_0176 | TPR domain protein. | DNA repair protein RecO. | 0.819 |
G5O_0349 | G5O_0040 | G5O_0349 | G5O_0040 | PBS lyase HEAT-like repeat domain protein. | FHA domain protein. | 0.771 |
G5O_0349 | G5O_0087 | G5O_0349 | G5O_0087 | PBS lyase HEAT-like repeat domain protein. | TPR domain protein. | 0.772 |
G5O_0349 | G5O_0518 | G5O_0349 | G5O_0518 | PBS lyase HEAT-like repeat domain protein. | Outer membrane protein, OMP85 family, putative. | 0.410 |
G5O_0349 | G5O_0697 | G5O_0349 | G5O_0697 | PBS lyase HEAT-like repeat domain protein. | Signal peptidase I. | 0.606 |
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