STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5O_0538ABC transporter, permease protein. (221 aa)    
Predicted Functional Partners:
G5O_0537
ABC transporter, ATP-binding protein.
 
 0.999
G5O_0539
D-methionine-binding lipoprotein MetQ, putative.
 
 0.999
G5O_0582
Amino acid ABC transporter, permease protein.
     
 0.818
G5O_0785
ABC transporter permease.
   
 
  0.786
G5O_0409
ABC transporter, ATP-binding protein.
     
 0.644
G5O_0475
ABC transporter, permease protein.
    
  0.590
G5O_0583
Amino acid ABC transporter, ATP-binding protein.
     
 0.585
G5O_0230
ABC transporter, ATP-binding protein.
    
  0.556
G5O_0474
ABC transporter domain protein.
    
  0.556
G5O_0635
Peptide ABC transporter, permease protein.
   
 
  0.545
Your Current Organism:
Chlamydia psittaci 6BC
NCBI taxonomy Id: 331636
Other names: C. psittaci 6BC, Chlamydophila psittaci 6BC, Chlamydophila psittaci ATCC VR-125, Chlamydophila psittaci str. 6BC, Chlamydophila psittaci strain 6BC, Psittacosis strain 6 BC
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