STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5O_0709Acyltransferase. (445 aa)    
Predicted Functional Partners:
G5O_0645
3-deoxy-manno-octulosonate cytidylyltransferase.
 
  
 0.992
lpxK
Tetraacyldisaccharide 4'-kinase.
 
 
 0.823
lpxB
Lipid-A-disaccharide synthase.
 
   
 0.781
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
 
   
 0.714
lpxC
UDP-3-0-acyl N-acetylglucosamine deacetylase.
 
   
 0.691
lpxA
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase.
 
   
 0.627
G5O_0249
Carbohydrate isomerase, KpsF/GutQ family.
 
   
 0.607
G5O_0708
Conserved hypothetical protein.
       0.535
G5O_0069
Polysaccharide deacetylase domain protein.
 
     0.531
G5O_0707
Conserved hypothetical protein TIGR00159.
       0.528
Your Current Organism:
Chlamydia psittaci 6BC
NCBI taxonomy Id: 331636
Other names: C. psittaci 6BC, Chlamydophila psittaci 6BC, Chlamydophila psittaci ATCC VR-125, Chlamydophila psittaci str. 6BC, Chlamydophila psittaci strain 6BC, Psittacosis strain 6 BC
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.