STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysQ3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (266 aa)    
Predicted Functional Partners:
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 
 0.995
ARN79280.1
Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
ARN79281.1
Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
 
 0.988
ARN76838.1
DHH family phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.910
ARN79278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.907
ARN79283.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.665
ARN79282.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.632
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
 
 
 
 0.550
ARN79275.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.533
ARN79276.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.533
Your Current Organism:
Nonlabens spongiae
NCBI taxonomy Id: 331648
Other names: JCM 13191, N. spongiae, NRRL B-41138, Nonlabens spongiae (Lau et al. 2006) Yi and Chun 2012, Stenothermobacter spongiae, Stenothermobacter spongiae Lau et al. 2006, strain UST030701-156
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