STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_12618Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
B0A49_13477
Uncharacterized protein.
   
    0.798
B0A49_11287
Uncharacterized protein.
  
   0.790
B0A49_13271
TruB_N domain-containing protein.
   
 0.783
B0A49_10814
TruB_N domain-containing protein.
   
 0.783
B0A49_00218
Centromere/microtubule-binding protein cbf5.
   
 0.743
B0A49_00222
PUA domain-containing protein.
   
 0.743
B0A49_05443
TRUD domain-containing protein.
   
 
 0.731
B0A49_06277
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.729
B0A49_05340
NmrA domain-containing protein; Belongs to the bacterial ribosomal protein bL17 family.
  
  
 0.729
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.706
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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