STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_09572Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (254 aa)    
Predicted Functional Partners:
B0A49_12307
PHD-type domain-containing protein.
    
 0.998
B0A49_12258
TATA-box-binding protein.
    
 0.992
B0A49_04947
Uncharacterized protein.
    
 0.992
B0A49_10818
Uncharacterized protein.
   
 0.992
B0A49_01421
Uncharacterized protein.
    
 0.991
B0A49_04332
Histone acetyltransferase GCN5.
    
 0.985
B0A49_09244
Uncharacterized protein.
    
 0.983
B0A49_09232
TAFII28 domain-containing protein.
   
 0.982
B0A49_09944
Uncharacterized protein.
   
 0.982
B0A49_06692
TAFII28 domain-containing protein.
   
 0.982
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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