STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_09914Pre-mRNA-splicing factor cwc22. (658 aa)    
Predicted Functional Partners:
B0A49_01247
WD_REPEATS_REGION domain-containing protein.
   
 0.990
B0A49_09332
Uncharacterized protein.
    
 0.988
B0A49_05977
ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family.
    
 0.987
B0A49_00779
Pre-mRNA-splicing factor CWC21.
    
 0.986
B0A49_00431
Pre-mRNA-splicing factor CWC25.
   
 0.983
B0A49_03916
Uncharacterized protein.
   
 0.979
B0A49_02252
Uncharacterized protein.
    
  0.978
B0A49_02485
Pre-mRNA-processing protein 45.
   
 
 0.973
B0A49_09367
Uncharacterized protein.
    
 
 0.969
B0A49_04392
PPIase cyclophilin-type domain-containing protein.
   
 0.968
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.