Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0A49_00102 | B0A49_00260 | A0A4U0Y016 | A0A4U0WUJ9 | Sm domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.999 |
B0A49_00102 | B0A49_02636 | A0A4U0Y016 | A0A4U0X5Q4 | Sm domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
B0A49_00102 | B0A49_05977 | A0A4U0Y016 | A0A4U0WWA9 | Sm domain-containing protein. | ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. | 0.980 |
B0A49_00102 | B0A49_07486 | A0A4U0Y016 | A0A4U0XLB8 | Sm domain-containing protein. | Polyadenylate-binding protein, cytoplasmic and nuclear. | 0.492 |
B0A49_00102 | B0A49_07642 | A0A4U0Y016 | A0A4U0WYQ2 | Sm domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.997 |
B0A49_00102 | B0A49_07921 | A0A4U0Y016 | A0A4U0WKM0 | Sm domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.997 |
B0A49_00102 | B0A49_09751 | A0A4U0Y016 | A0A4U0VQE4 | Sm domain-containing protein. | Uncharacterized protein. | 0.987 |
B0A49_00102 | B0A49_13085 | A0A4U0Y016 | A0A4U0W3T8 | Sm domain-containing protein. | Uncharacterized protein. | 0.686 |
B0A49_00260 | B0A49_00102 | A0A4U0WUJ9 | A0A4U0Y016 | Small nuclear ribonucleoprotein G. | Sm domain-containing protein. | 0.999 |
B0A49_00260 | B0A49_02636 | A0A4U0WUJ9 | A0A4U0X5Q4 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
B0A49_00260 | B0A49_05977 | A0A4U0WUJ9 | A0A4U0WWA9 | Small nuclear ribonucleoprotein G. | ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. | 0.881 |
B0A49_00260 | B0A49_07642 | A0A4U0WUJ9 | A0A4U0WYQ2 | Small nuclear ribonucleoprotein G. | Nuclear cap-binding protein subunit 2. | 0.996 |
B0A49_00260 | B0A49_07921 | A0A4U0WUJ9 | A0A4U0WKM0 | Small nuclear ribonucleoprotein G. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.996 |
B0A49_00260 | B0A49_09751 | A0A4U0WUJ9 | A0A4U0VQE4 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.984 |
B0A49_00260 | B0A49_13085 | A0A4U0WUJ9 | A0A4U0W3T8 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.690 |
B0A49_00575 | B0A49_07642 | A0A4U0XT61 | A0A4U0WYQ2 | Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | Nuclear cap-binding protein subunit 2. | 0.746 |
B0A49_00575 | B0A49_13085 | A0A4U0XT61 | A0A4U0W3T8 | Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | Uncharacterized protein. | 0.791 |
B0A49_02277 | B0A49_07642 | A0A4U0XLY5 | A0A4U0WYQ2 | Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | Nuclear cap-binding protein subunit 2. | 0.746 |
B0A49_02277 | B0A49_13085 | A0A4U0XLY5 | A0A4U0W3T8 | Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. | Uncharacterized protein. | 0.791 |
B0A49_02636 | B0A49_00102 | A0A4U0X5Q4 | A0A4U0Y016 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Sm domain-containing protein. | 0.999 |
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