STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_10812Velvet domain-containing protein. (318 aa)    
Predicted Functional Partners:
B0A49_05060
Cytochrome b561 domain-containing protein.
    
  0.756
B0A49_06857
WD_REPEATS_REGION domain-containing protein.
   
 0.657
B0A49_01998
Ipi1_N domain-containing protein.
    
  0.615
B0A49_00961
Ipi1_N domain-containing protein.
    
  0.615
B0A49_10832
Xanthine dehydrogenase.
   
 
  0.597
B0A49_11567
Xanthine dehydrogenase.
   
 
  0.597
B0A49_10269
Xanthine dehydrogenase.
   
 
  0.597
B0A49_11487
BRCT domain-containing protein.
   
  0.593
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  0.593
B0A49_01210
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.584
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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