STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_11460WD_REPEATS_REGION domain-containing protein. (412 aa)    
Predicted Functional Partners:
B0A49_12498
CPSF_A domain-containing protein.
    
 0.969
B0A49_06908
CPSF_A domain-containing protein.
    
 0.969
B0A49_00103
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.884
B0A49_05064
SET domain-containing protein.
 
      0.811
B0A49_00114
PCI domain-containing protein.
    
 0.804
B0A49_00066
COP9 signalosome complex subunit 5.
    
 0.782
B0A49_07838
Uncharacterized protein.
     
 0.765
B0A49_00772
Uncharacterized protein.
    
  0.753
B0A49_01693
Histone acetyltransferase type B subunit 2.
    
  0.749
B0A49_06875
PCI domain-containing protein.
    
  0.740
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.