STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_10829Uncharacterized protein. (722 aa)    
Predicted Functional Partners:
B0A49_04832
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.928
B0A49_07567
TAFII55_N domain-containing protein.
    
 
 0.909
B0A49_06543
TAFII55_N domain-containing protein.
    
 
 0.909
B0A49_01079
Myb-like domain-containing protein.
    
 
 0.846
B0A49_09320
Histone H2A; Belongs to the histone H2A family.
    
 
 0.797
B0A49_11493
Histone H3-like centromeric protein hH3v.
    
 
 0.781
B0A49_06325
Histone H3; Belongs to the histone H3 family.
    
 
 0.781
B0A49_02759
Histone H3-like centromeric protein hH3v.
    
 
 0.781
B0A49_01481
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 
 0.751
B0A49_11281
HSA domain-containing protein.
   
 
 0.716
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.