STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_09178Uncharacterized protein. (602 aa)    
Predicted Functional Partners:
B0A49_01247
WD_REPEATS_REGION domain-containing protein.
   
 0.983
B0A49_06835
Pre-mRNA-processing-splicing factor 8.
    
 
 0.954
B0A49_00038
Pre-mRNA-splicing factor cwc2.
    
  0.937
B0A49_01763
Uncharacterized protein.
    
   0.936
B0A49_07066
Pre-mRNA-splicing factor prp46.
   
   0.933
B0A49_02485
Pre-mRNA-processing protein 45.
   
   0.927
B0A49_10494
Uncharacterized protein.
   
   0.917
B0A49_09440
Putative small nuclear ribonucleoprotein F.
    
   0.916
B0A49_02636
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
   0.916
B0A49_00260
Small nuclear ribonucleoprotein G.
    
   0.912
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.