STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_08724Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
B0A49_09600
Polyadenylation factor subunit 2.
   
 0.990
B0A49_04395
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.989
B0A49_00075
WD_REPEATS_REGION domain-containing protein.
    
 0.989
B0A49_01882
Uncharacterized protein.
    
 0.989
B0A49_11288
YTH domain-containing protein.
   
 0.980
B0A49_04273
Uncharacterized protein.
   
 0.980
B0A49_09871
Uncharacterized protein.
    
 0.977
B0A49_05027
Endoribonuclease YSH1.
    
 0.972
B0A49_01710
Endoribonuclease YSH1.
    
 0.972
B0A49_12330
Fip1 domain-containing protein.
    
 0.967
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.