STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_04582Uncharacterized protein. (401 aa)    
Predicted Functional Partners:
B0A49_01414
Uncharacterized protein.
   
 0.991
B0A49_09062
SRP9-21 domain-containing protein.
   
 0.990
B0A49_03582
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.987
B0A49_00125
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.987
B0A49_08053
60S ribosomal protein L25.
   
 0.917
B0A49_02253
60S ribosomal protein L22.
   
  0.893
B0A49_01783
60S ribosomal protein L30.
   
   0.893
B0A49_09422
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
  0.892
B0A49_02355
60S ribosomal protein L35.
   
   0.891
B0A49_04061
60S ribosomal protein L33-A.
    
   0.889
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.