B0A49_06565 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_06565

Uncharacterized protein. (851 aa)

Predicted Functional Partners:

B0A49_06541

0.996

B0A49_05147

0.994

B0A49_11492

0.992

B0A49_02760

0.992

B0A49_11048

0.959

B0A49_09201

0.959

B0A49_05513

0.959

B0A49_08547

0.959

B0A49_08269

0.959

B0A49_09429

0.959

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_02760	B0A49_05147	A0A4U0X990	A0A4U0XC84	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	RING-type domain-containing protein.	0.991
B0A49_02760	B0A49_05513	A0A4U0X990	A0A4U0WYD4	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	ATPase_AAA_core domain-containing protein.	0.892
B0A49_02760	B0A49_06541	A0A4U0X990	A0A4U0WU39	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.991
B0A49_02760	B0A49_06565	A0A4U0X990	A0A4U0WVV9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.992
B0A49_02760	B0A49_08269	A0A4U0X990	A0A4V5NED7	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.892
B0A49_02760	B0A49_08547	A0A4U0X990	A0A4U0WZY7	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.892
B0A49_02760	B0A49_09201	A0A4U0X990	A0A4U0WIC9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.892
B0A49_02760	B0A49_09429	A0A4U0X990	A0A4V5NF68	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.892
B0A49_02760	B0A49_11048	A0A4U0X990	A0A4U0WI26	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.892
B0A49_05147	B0A49_02760	A0A4U0XC84	A0A4U0X990	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.991
B0A49_05147	B0A49_05513	A0A4U0XC84	A0A4U0WYD4	RING-type domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.960
B0A49_05147	B0A49_06541	A0A4U0XC84	A0A4U0WU39	RING-type domain-containing protein.	Uncharacterized protein.	0.994
B0A49_05147	B0A49_06565	A0A4U0XC84	A0A4U0WVV9	RING-type domain-containing protein.	Uncharacterized protein.	0.994
B0A49_05147	B0A49_08269	A0A4U0XC84	A0A4V5NED7	RING-type domain-containing protein.	Uncharacterized protein.	0.960
B0A49_05147	B0A49_08547	A0A4U0XC84	A0A4U0WZY7	RING-type domain-containing protein.	Uncharacterized protein.	0.960
B0A49_05147	B0A49_09201	A0A4U0XC84	A0A4U0WIC9	RING-type domain-containing protein.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.960
B0A49_05147	B0A49_09429	A0A4U0XC84	A0A4V5NF68	RING-type domain-containing protein.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.960
B0A49_05147	B0A49_11048	A0A4U0XC84	A0A4U0WI26	RING-type domain-containing protein.	Uncharacterized protein.	0.960
B0A49_05147	B0A49_11492	A0A4U0XC84	A0A4U0W6W3	RING-type domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.991
B0A49_05513	B0A49_02760	A0A4U0WYD4	A0A4U0X990	ATPase_AAA_core domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.892