STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_05671Protein SDA1. (69 aa)    
Predicted Functional Partners:
B0A49_04039
Nucleolar GTP-binding protein 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 
 0.994
B0A49_04817
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.994
B0A49_09006
Uncharacterized protein.
   
 
 0.985
B0A49_11594
GN3L_Grn1 domain-containing protein.
   
 
 0.985
B0A49_04533
RRM domain-containing protein.
   
 
 0.984
B0A49_06857
WD_REPEATS_REGION domain-containing protein.
   
 
 0.982
B0A49_00116
Ribosome biogenesis protein NSA2.
   
 
 0.975
B0A49_01775
WD_REPEATS_REGION domain-containing protein.
   
 
 0.973
B0A49_08911
WD_REPEATS_REGION domain-containing protein.
   
 
 0.973
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.972
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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