B0A49_09317 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_09317

Uncharacterized protein. (299 aa)

Predicted Functional Partners:

B0A49_06176

0.862

B0A49_00021

0.677

B0A49_04103

0.644

B0A49_01431

0.638

B0A49_01179

0.632

B0A49_11769

0.604

B0A49_10112

0.604

B0A49_05887

0.604

B0A49_04776

0.592

B0A49_01211

0.592

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_00021	B0A49_09317	A0A4U0XWW8	A0A4U0WXZ6	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.677
B0A49_01179	B0A49_01431	A0A4U0XI10	A0A4U0XRH5	PALP domain-containing protein.	Uncharacterized protein.	0.846
B0A49_01179	B0A49_04103	A0A4U0XI10	A0A4U0XDM3	PALP domain-containing protein.	Uncharacterized protein.	0.879
B0A49_01179	B0A49_05887	A0A4U0XI10	A0A4V5NCR7	PALP domain-containing protein.	Uncharacterized protein.	0.776
B0A49_01179	B0A49_06176	A0A4U0XI10	A0A4U0WM62	PALP domain-containing protein.	Tryptophan synthase.	0.933
B0A49_01179	B0A49_09317	A0A4U0XI10	A0A4U0WXZ6	PALP domain-containing protein.	Uncharacterized protein.	0.632
B0A49_01179	B0A49_10112	A0A4U0XI10	A0A4U0WUM1	PALP domain-containing protein.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.789
B0A49_01179	B0A49_11769	A0A4U0XI10	A0A4U0WAW3	PALP domain-containing protein.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.789
B0A49_01211	B0A49_01431	A0A4U0XNV9	A0A4U0XRH5	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Uncharacterized protein.	0.453
B0A49_01211	B0A49_04103	A0A4U0XNV9	A0A4U0XDM3	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Uncharacterized protein.	0.406
B0A49_01211	B0A49_06176	A0A4U0XNV9	A0A4U0WM62	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Tryptophan synthase.	0.818
B0A49_01211	B0A49_09317	A0A4U0XNV9	A0A4U0WXZ6	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	Uncharacterized protein.	0.592
B0A49_01431	B0A49_01179	A0A4U0XRH5	A0A4U0XI10	Uncharacterized protein.	PALP domain-containing protein.	0.846
B0A49_01431	B0A49_01211	A0A4U0XRH5	A0A4U0XNV9	Uncharacterized protein.	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	0.453
B0A49_01431	B0A49_04103	A0A4U0XRH5	A0A4U0XDM3	Uncharacterized protein.	Uncharacterized protein.	0.892
B0A49_01431	B0A49_04776	A0A4U0XRH5	A0A4U0WTT8	Uncharacterized protein.	Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.	0.453
B0A49_01431	B0A49_05887	A0A4U0XRH5	A0A4V5NCR7	Uncharacterized protein.	Uncharacterized protein.	0.843
B0A49_01431	B0A49_06176	A0A4U0XRH5	A0A4U0WM62	Uncharacterized protein.	Tryptophan synthase.	0.919
B0A49_01431	B0A49_09317	A0A4U0XRH5	A0A4U0WXZ6	Uncharacterized protein.	Uncharacterized protein.	0.638
B0A49_01431	B0A49_10112	A0A4U0XRH5	A0A4U0WUM1	Uncharacterized protein.	Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.852