STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_0669360S ribosomal protein L4-A. (372 aa)    
Predicted Functional Partners:
B0A49_09575
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.995
B0A49_08053
60S ribosomal protein L25.
  
 0.995
B0A49_09174
60S ribosomal protein L7.
  
 0.995
B0A49_03939
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.995
B0A49_01783
60S ribosomal protein L30.
  
 0.995
B0A49_00353
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
B0A49_03873
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.995
B0A49_01210
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.994
B0A49_06107
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.994
B0A49_08717
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.