STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_10719PAT1 domain-containing protein. (805 aa)    
Predicted Functional Partners:
B0A49_04420
Sm domain-containing protein.
    
 0.997
B0A49_02965
Sm domain-containing protein.
    
 0.997
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.996
B0A49_11348
Nudix hydrolase domain-containing protein.
    
 0.994
B0A49_06758
U6 snRNA-associated Sm-like protein LSm6.
    
  0.994
B0A49_04463
Uncharacterized protein.
    
 0.994
B0A49_00033
Uncharacterized protein.
    
 0.994
B0A49_12343
Uncharacterized protein.
    
 0.991
B0A49_13094
Uncharacterized protein.
    
 0.991
B0A49_11084
Sm domain-containing protein.
   
 0.991
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.