B0A49_04553 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_04553

t-SNARE coiled-coil homology domain-containing protein. (243 aa)

Predicted Functional Partners:

B0A49_05110

0.997

B0A49_03406

0.997

B0A49_02354

0.997

B0A49_00467

0.997

B0A49_01029

0.993

B0A49_01033

0.993

B0A49_06438

0.992

B0A49_00908

0.992

B0A49_10354

0.989

B0A49_02343

0.988

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_00467	B0A49_00908	A0A4U0XVR4	A0A4U0XU23	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	0.992
B0A49_00467	B0A49_01029	A0A4U0XVR4	A0A4U0XPS1	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.993
B0A49_00467	B0A49_01033	A0A4U0XVR4	A0A4U0XUJ8	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.993
B0A49_00467	B0A49_02343	A0A4U0XVR4	A0A4V5NHC3	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein.	0.995
B0A49_00467	B0A49_02354	A0A4U0XVR4	A0A4U0XLU1	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.997
B0A49_00467	B0A49_03406	A0A4U0XVR4	A0A4U0XBP2	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	t-SNARE coiled-coil homology domain-containing protein.	0.997
B0A49_00467	B0A49_04553	A0A4U0XVR4	A0A4U0X252	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	t-SNARE coiled-coil homology domain-containing protein.	0.997
B0A49_00467	B0A49_05110	A0A4U0XVR4	A0A4U0XB97	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.997
B0A49_00467	B0A49_06438	A0A4U0XVR4	A0A4U0WNV1	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.992
B0A49_00467	B0A49_10354	A0A4U0XVR4	A0A4U0WNX9	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	Uncharacterized protein.	0.975
B0A49_00908	B0A49_00467	A0A4U0XU23	A0A4U0XVR4	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.992
B0A49_00908	B0A49_01029	A0A4U0XU23	A0A4U0XPS1	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.981
B0A49_00908	B0A49_01033	A0A4U0XU23	A0A4U0XUJ8	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.981
B0A49_00908	B0A49_02343	A0A4U0XU23	A0A4V5NHC3	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.891
B0A49_00908	B0A49_02354	A0A4U0XU23	A0A4U0XLU1	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.993
B0A49_00908	B0A49_03406	A0A4U0XU23	A0A4U0XBP2	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	t-SNARE coiled-coil homology domain-containing protein.	0.993
B0A49_00908	B0A49_04553	A0A4U0XU23	A0A4U0X252	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	t-SNARE coiled-coil homology domain-containing protein.	0.992
B0A49_00908	B0A49_05110	A0A4U0XU23	A0A4U0XB97	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.991
B0A49_00908	B0A49_10354	A0A4U0XU23	A0A4U0WNX9	Synaptobrevin ykt6; Belongs to the synaptobrevin family.	Uncharacterized protein.	0.985
B0A49_01029	B0A49_00467	A0A4U0XPS1	A0A4U0XVR4	Uncharacterized protein; Belongs to the synaptobrevin family.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.993