STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_05279HTH CENPB-type domain-containing protein. (828 aa)    
Predicted Functional Partners:
B0A49_13142
Vacuolar protein sorting-associated protein 27.
   
 0.936
B0A49_07312
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
   
 0.936
B0A49_08069
Vacuolar protein sorting-associated protein 27.
   
 0.936
B0A49_12229
Polyubiquitin.
    
 0.917
B0A49_13718
Polyubiquitin.
    
 0.917
B0A49_08071
Uncharacterized protein.
    
 0.908
B0A49_10214
MPN domain-containing protein.
    
 0.892
B0A49_05471
MPN domain-containing protein.
    
 0.892
B0A49_10754
Uncharacterized protein.
   
 0.880
B0A49_07476
SB domain-containing protein.
   
 0.880
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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